MLOC_40675 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.34468300
LEAShoots from the seedlings (10 cm shoot stage)000.7726910
INF1Young developing inflorescences (5mm)0.3821950.9265660.9460610
INF2Developing inflorescences (1-1.5 cm)1.41150.7733340.3970920
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.1707840.2060320.09363670
CAR5Developing grain, bracts removed (5 DPA)000.6161130
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_40675






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK374884
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374884CUST_22733_PI427708080NoneNoneNone
MLOC_25062.1NoneAvailableNonecontig_1668648 (Mapped)
MLOC_30480.1NoneAvailableNonecontig_2101822 (Not mapped)
MLOC_30967.1NoneAvailableNonecontig_214406 (Mapped)
MLOC_30968.2NoneAvailableNonecontig_214406 (Mapped)
MLOC_31135.1NoneAvailableNonecontig_216023 (Mapped)
MLOC_3433.3NoneAvailableAvailablecontig_130818 (Mapped)
MLOC_40675.1NoneAvailableNonecontig_2562853 (Mapped)
MLOC_40676.2NoneAvailableNonecontig_2562853 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----