- Predicted Gene MLOC_40613
MLOC_40613 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_40613_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_40613_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.35572 | 2.20541 | 1.70917 | 1.37396 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 17.6278 | 39.8285 | 19.2633 | 15.4749 |
INF1 | Young developing inflorescences (5mm) | 0.908499 | 1.45926 | 0.837278 | 0.728101 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.26343 | 0.635701 | 0.834008 | 0.861124 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.26104 | 1.13666 | 3.35198 | 1.04253 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.95655 | 1.10922 | 2.84961 | 3.12576 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.694698 | 0.754199 | 2.86621 | 1.02168 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.538739 | 0.352802 | 0.314997 | 0.918167 |
CDS Structure of MLOC_40613
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_40613.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g22520.1 |
-3 |
1e-14 |
74 |
34/36 (94%) |
13101.m02388 protein dihydrolipoyl dehydrogenase 1, mitochondrial precursor, putative, expressed |
TAIR PP10 |
AT3G17240.2 |
-3 |
2e-16 |
74 |
35/36 (97%) |
| Symbols: mtLPD2 | lipoamide dehydrogenase 2 | chr3:5891783-5892166 REVERSE LENGTH=127 |