MLOC_4059 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains21.295117.951523.457221.4963
LEAShoots from the seedlings (10 cm shoot stage)32.971233.349537.254732.7485
INF1Young developing inflorescences (5mm)21.860824.747329.221722.4655
INF2Developing inflorescences (1-1.5 cm)37.215830.500833.035138.3337
ROORoots from the seedlings (10 cm shoot stage)28.682527.961824.66638.3608
NODDeveloping tillers at six leaf stage, 3rd internode36.389950.801574.4397203.214
CAR5Developing grain, bracts removed (5 DPA)28.379827.744129.244129.6791
CAR15Developing grain, bracts removed (15 DPA)11.015212.031810.965826.8022



CDS Structure of MLOC_4059






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_4059.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_4059.1CUST_11858_PI427708080AvailableAvailablecontig_134629 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g73970.1 -3 0.0 723 352/403 (87%) 13101.m08080 protein lysine ketoglutarate reductase trans-splicing related 1, putative, expressed
TAIR PP10 AT1G67850.2 -3 0.0 544 268/397 (68%) Protein of unknown function (DUF707) | chr1:25439204-25441904 FORWARD LENGTH=404