MLOC_4059 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_4059_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 21.2951 | 17.9515 | 23.4572 | 21.4963 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 32.9712 | 33.3495 | 37.2547 | 32.7485 |
INF1 | Young developing inflorescences (5mm) | 21.8608 | 24.7473 | 29.2217 | 22.4655 |
INF2 | Developing inflorescences (1-1.5 cm) | 37.2158 | 30.5008 | 33.0351 | 38.3337 |
ROO | Roots from the seedlings (10 cm shoot stage) | 28.6825 | 27.9618 | 24.666 | 38.3608 |
NOD | Developing tillers at six leaf stage, 3rd internode | 36.3899 | 50.8015 | 74.4397 | 203.214 |
CAR5 | Developing grain, bracts removed (5 DPA) | 28.3798 | 27.7441 | 29.2441 | 29.6791 |
CAR15 | Developing grain, bracts removed (15 DPA) | 11.0152 | 12.0318 | 10.9658 | 26.8022 |
CDS Structure of MLOC_4059
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4059.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g73970.1 |
-3 |
0.0 |
723 |
352/403 (87%) |
13101.m08080 protein lysine ketoglutarate reductase trans-splicing related 1, putative, expressed |
TAIR PP10 |
AT1G67850.2 |
-3 |
0.0 |
544 |
268/397 (68%) |
Protein of unknown function (DUF707) | chr1:25439204-25441904 FORWARD LENGTH=404 |