MLOC_4058 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 24.7783 | 24.3524 | 25.9207 | 24.9512 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 23.3193 | 20.0337 | 21.0759 | 17.5631 |
| INF1 | Young developing inflorescences (5mm) | 11.1518 | 12.1118 | 13.6174 | 10.5164 |
| INF2 | Developing inflorescences (1-1.5 cm) | 12.7981 | 12.8017 | 13.102 | 13.8274 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 35.1242 | 26.7311 | 27.3607 | 31.7062 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 34.7289 | 29.0008 | 34.6862 | 88.5637 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 27.4503 | 26.3974 | 27.1255 | 25.6023 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 12.9846 | 13.7635 | 12.2805 | 30.8064 |
CDS Structure of MLOC_4058
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4058.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g09190.1 |
+1 |
0.0 |
770 |
383/451 (85%) |
13108.m00963 protein auxin efflux carrier component, putative, expressed |
| TAIR PP10 |
AT1G71090.1 |
+1 |
0.0 |
605 |
297/440 (68%) |
Auxin efflux carrier family protein | chr1:26812551-26813924 FORWARD LENGTH=457 |
