- Predicted Gene MLOC_40573
MLOC_40573 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 0.104897 | 0.0529779 | 0.134472 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.0632007 | 0 | 0 | 0.0641996 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0.0874846 | 0.128013 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0616304 | 0.0840684 | 0.0417884 | 0.0847167 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.065896 | 0.072933 | 0 | 0.153036 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.062312 | 0.046972 | 0.0204346 | 0.170807 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 146.063 | 132.516 | 141.217 | 147.737 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 13.4332 | 16.6128 | 28.8315 | 42.2373 |
CDS Structure of MLOC_40573
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_40573.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g43010.1 |
+2 |
0.0 |
536 |
253/364 (70%) |
13102.m04770 protein vacuolar-processing enzyme precursor, putative, expressed |
| TAIR PP10 |
AT1G62710.1 |
+2 |
4e-154 |
449 |
217/366 (59%) |
| Symbols: BETA-VPE, BETAVPE | beta vacuolar processing enzyme | chr1:23224070-23226857 REVERSE LENGTH=486 |