MLOC_40542 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains85.211697.389391.92130
LEAShoots from the seedlings (10 cm shoot stage)62.271656.30225.36290
INF1Young developing inflorescences (5mm)121.876134.892144.1260
INF2Developing inflorescences (1-1.5 cm)204.548129.734132.3380
ROORoots from the seedlings (10 cm shoot stage)44.939542.7512105.120
NODDeveloping tillers at six leaf stage, 3rd internode57.20917.472933.1580
CAR5Developing grain, bracts removed (5 DPA)52.215173.307454.41970
CAR15Developing grain, bracts removed (15 DPA)15.049212.953715.70930



CDS Structure of MLOC_40542






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK362602
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362602CUST_20572_PI427708080NoneNoneNone
MLOC_40542.1NoneAvailableNonecontig_2560913 (Mapped)
MLOC_53110.3NoneAvailableAvailablecontig_38066 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----