MLOC_4050 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.93942 | 8.78734 | 5.41323 | 4.57384 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.409 | 8.59648 | 8.97362 | 5.43489 |
| INF1 | Young developing inflorescences (5mm) | 16.2568 | 18.3837 | 16.0917 | 8.81766 |
| INF2 | Developing inflorescences (1-1.5 cm) | 12.533 | 21.5371 | 14.5584 | 12.0239 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.60292 | 5.35901 | 2.06043 | 3.44846 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.70625 | 3.79694 | 3.96606 | 8.84428 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.03296 | 9.39461 | 12.3145 | 6.15291 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.1355 | 3.76799 | 4.7256 | 5.80977 |
CDS Structure of MLOC_4050
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4050.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g58680.1 |
+1 |
3e-33 |
129 |
59/62 (95%) |
13101.m06230 protein apurinic endonuclease-redox protein, putative, expressed |
| TAIR PP10 |
AT2G41460.1 |
+1 |
7e-23 |
99 |
42/62 (68%) |
| Symbols: ARP | apurinic endonuclease-redox protein | chr2:17285731-17288769 FORWARD LENGTH=536 |
