- Predicted Gene MLOC_40480
MLOC_40480 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 24.2644 | 11.7091 | 14.0862 | 14.8421 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 9.14554 | 2.65138 | 1.80489 | 4.28812 |
| INF1 | Young developing inflorescences (5mm) | 29.0477 | 25.6507 | 32.7669 | 23.261 |
| INF2 | Developing inflorescences (1-1.5 cm) | 14.0113 | 23.2668 | 20.0747 | 22.8876 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.71326 | 9.09832 | 8.01121 | 10.6897 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.353329 | 0.552656 | 0.65503 | 3.22227 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 17.0519 | 22.8196 | 20.7532 | 19.5797 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.81557 | 1.11245 | 0.754784 | 4.46166 |
CDS Structure of MLOC_40480
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_40480.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g05900.1 |
-1 |
7e-35 |
124 |
64/64 (100%) |
13101.m00576 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative |
| TAIR PP10 |
AT5G22880.1 |
-1 |
6e-34 |
121 |
61/64 (95%) |
| Symbols: H2B, HTB2 | histone B2 | chr5:7652130-7652567 REVERSE LENGTH=145 |