MLOC_40441 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.6428819.668316.975411.2252
LEAShoots from the seedlings (10 cm shoot stage)31.385333.036123.602821.4192
INF1Young developing inflorescences (5mm)59.742758.382454.428238.1838
INF2Developing inflorescences (1-1.5 cm)46.489155.968947.685647.0009
ROORoots from the seedlings (10 cm shoot stage)5.6024313.6312.13711.8019
NODDeveloping tillers at six leaf stage, 3rd internode7.584226.220927.8753419.655
CAR5Developing grain, bracts removed (5 DPA)17.751216.214317.982413.7509
CAR15Developing grain, bracts removed (15 DPA)26.795323.193420.992744.9499



CDS Structure of MLOC_40441






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK363069
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363069CUST_20658_PI427708080NoneNoneNone
MLOC_23113.1NoneAvailableNonecontig_161734 (Mapped)
MLOC_3967.1NoneAvailableNonecontig_134498 (Mapped)
MLOC_40441.2NoneAvailableAvailablecontig_2559681 (Mapped)
MLOC_46284.1NoneAvailableNonecontig_28806 (Not mapped)
MLOC_48660.1NoneAvailableNonecontig_327508 (Not mapped)
MLOC_70616.1NoneAvailableNonecontig_58245 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----