MLOC_40430 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains18.477530.234326.80530
LEAShoots from the seedlings (10 cm shoot stage)24.43128.072629.799520
INF1Young developing inflorescences (5mm)39.716439.815940.76910
INF2Developing inflorescences (1-1.5 cm)50.2644.730942.10340
ROORoots from the seedlings (10 cm shoot stage)8.3222314.373812.9260
NODDeveloping tillers at six leaf stage, 3rd internode30.104128.867523.53380
CAR5Developing grain, bracts removed (5 DPA)23.061224.608325.85510
CAR15Developing grain, bracts removed (15 DPA)12.150510.070712.4460



CDS Structure of MLOC_40430






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK361285
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361285CUST_20348_PI427708080NoneNoneNone
MLOC_13559.1NoneAvailableNonecontig_1565914 (Mapped)
MLOC_40430.2NoneAvailableNonecontig_2559528 (Not mapped)
MLOC_45319.1NoneAvailableAvailablecontig_277261 (Mapped)
MLOC_46580.1NoneAvailableNonecontig_292538 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----