MLOC_40404 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.746238.629137.564420
LEAShoots from the seedlings (10 cm shoot stage)10.99153.142686.029610
INF1Young developing inflorescences (5mm)7.5669611.64689.093770
INF2Developing inflorescences (1-1.5 cm)8.4436110.44669.442890
ROORoots from the seedlings (10 cm shoot stage)3.308892.796932.196560
NODDeveloping tillers at six leaf stage, 3rd internode13.937416.070415.03090
CAR5Developing grain, bracts removed (5 DPA)22.04924.742825.52530
CAR15Developing grain, bracts removed (15 DPA)8.510039.1816411.55820



CDS Structure of MLOC_40404






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK366818
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366818CUST_13750_PI427708083NoneNoneNone
MLOC_40404.1NoneAvailableNonecontig_2559171 (Mapped)
MLOC_58333.1NoneAvailableAvailablecontig_42567 (Mapped)
MLOC_66022.1NoneAvailableNonecontig_51016 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----