MLOC_4037 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.094334.89894.751784.07958
LEAShoots from the seedlings (10 cm shoot stage)2.818245.479395.734783.52689
INF1Young developing inflorescences (5mm)0.4911440.9468550.9462350.651562
INF2Developing inflorescences (1-1.5 cm)0.5187510.1889420.6518480.454204
ROORoots from the seedlings (10 cm shoot stage)4.757363.734664.78364.67331
NODDeveloping tillers at six leaf stage, 3rd internode2.401522.573593.096497.05663
CAR5Developing grain, bracts removed (5 DPA)0.3015341.044331.05970.816071
CAR15Developing grain, bracts removed (15 DPA)0.6930640.5825780.3355031.34685



CDS Structure of MLOC_4037






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_4037.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_4037.1CUST_12336_PI427708083AvailableAvailablecontig_134600 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g40510.1 -2 3e-52 176 85/98 (87%) 13106.m04213 protein CRAL/TRIO domain containing protein
TAIR PP10 AT5G47730.1 -2 7e-40 142 63/100 (63%) Sec14p-like phosphatidylinositol transfer family protein | chr5:19334592-19336618 REVERSE LENGTH=341