MLOC_40318 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.127032.134792.619982.30022
LEAShoots from the seedlings (10 cm shoot stage)2.430131.817354.335562.27185
INF1Young developing inflorescences (5mm)4.140223.948645.981573.27746
INF2Developing inflorescences (1-1.5 cm)7.825395.837157.252196.56717
ROORoots from the seedlings (10 cm shoot stage)2.01072.592013.790252.82045
NODDeveloping tillers at six leaf stage, 3rd internode2.600173.21294.6415610.3156
CAR5Developing grain, bracts removed (5 DPA)2.597762.267122.611622.08554
CAR15Developing grain, bracts removed (15 DPA)1.641591.674781.832523.38683



CDS Structure of MLOC_40318






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_40318.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_40318.1CUST_12334_PI427708083AvailableAvailablecontig_2558176 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g03910.1 -3 1e-11 67 33/49 (67%) 13105.m00384 protein RNA polymerase II-associated protein 3, putative, expressed
TAIR PP10None-----