MLOC_40272 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.568173.554914.56460
LEAShoots from the seedlings (10 cm shoot stage)4.440111.989241.648480
INF1Young developing inflorescences (5mm)8.65344.587853.531990
INF2Developing inflorescences (1-1.5 cm)2.499591.838472.027240
ROORoots from the seedlings (10 cm shoot stage)25.372729.825824.98060
NODDeveloping tillers at six leaf stage, 3rd internode4.702263.926752.936750
CAR5Developing grain, bracts removed (5 DPA)0.09169270.5243031.072080
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_40272






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK252705.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252705.1CUST_19185_PI427708080NoneNoneNone
MLOC_38733.1NoneAvailableNonecontig_2551220 (Mapped)
MLOC_40272.1NoneAvailableNonecontig_2557739 (Not mapped)
MLOC_47904.1NoneAvailableAvailablecontig_314305 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----