- Predicted Gene MLOC_40271
MLOC_40271 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_40271_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_40271_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0.492428 | 0.460063 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.4929 | 22.0855 | 19.5492 | 11.7663 |
INF1 | Young developing inflorescences (5mm) | 0.160862 | 0 | 0 | 0.156231 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.52332 | 2.5384 | 1.64341 | 1.93946 |
ROO | Roots from the seedlings (10 cm shoot stage) | 25.2852 | 31.757 | 17.1454 | 29.7787 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0 | 0 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_40271
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_40271.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g08960.1 |
-2 |
9e-26 |
100 |
45/61 (74%) |
13108.m00939 protein Cupin domain containing protein, expressed |
TAIR PP10 |
AT5G39110.1 |
-2 |
6e-11 |
58 |
31/55 (56%) |
RmlC-like cupins superfamily protein | chr5:15657802-15658584 REVERSE LENGTH=222 |