MLOC_40266 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains314.092207.39246.307188.504
LEAShoots from the seedlings (10 cm shoot stage)145.94788.6417205.0497.6819
INF1Young developing inflorescences (5mm)47.082951.995652.400830.5544
INF2Developing inflorescences (1-1.5 cm)22.05726.24431.240620.6246
ROORoots from the seedlings (10 cm shoot stage)361.083208.355250.346217.316
NODDeveloping tillers at six leaf stage, 3rd internode197.791135.593100.534329.286
CAR5Developing grain, bracts removed (5 DPA)79.031979.03372.223753.6806
CAR15Developing grain, bracts removed (15 DPA)21.747620.357317.809533.7959



CDS Structure of MLOC_40266






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_40266.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_40266.1CUST_12332_PI427708083AvailableAvailablecontig_2557678 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g34770.1 -3 7e-12 64 29/36 (81%) 13105.m03622 protein cytochrome c, putative, expressed
TAIR PP10 AT1G22840.1 -3 3e-12 64 29/36 (81%) | Symbols: CYTC-1, ATCYTC-A | CYTOCHROME C-1 | chr1:8079384-8080286 FORWARD LENGTH=114