MLOC_40253 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains37.915955.38942.82990
LEAShoots from the seedlings (10 cm shoot stage)9.8692181.631262.98290
INF1Young developing inflorescences (5mm)10.831919.91320.89020
INF2Developing inflorescences (1-1.5 cm)9.749789.4821610.55520
ROORoots from the seedlings (10 cm shoot stage)27.684833.499138.58520
NODDeveloping tillers at six leaf stage, 3rd internode14.043214.045515.07730
CAR5Developing grain, bracts removed (5 DPA)31.303226.525721.01830
CAR15Developing grain, bracts removed (15 DPA)9.803957.582157.227150



CDS Structure of MLOC_40253






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK374210
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374210CUST_13870_PI427708083NoneNoneNone
MLOC_33043.1NoneAvailableNonecontig_234009 (Not mapped)
MLOC_40253.1NoneAvailableNonecontig_2557538 (Mapped)
MLOC_41800.1NoneAvailableNonecontig_260707 (Mapped)
MLOC_74315.1NoneAvailableAvailablecontig_65579 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----