MLOC_40224 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.628312.618711.910915.0855
LEAShoots from the seedlings (10 cm shoot stage)18.385458.008288.990253.5078
INF1Young developing inflorescences (5mm)0.2640070.1497020.1123540.169585
INF2Developing inflorescences (1-1.5 cm)0.4084780.5493910.9656070.774018
ROORoots from the seedlings (10 cm shoot stage)9.741612.195212.924816.4064
NODDeveloping tillers at six leaf stage, 3rd internode19.464914.973314.938347.7947
CAR5Developing grain, bracts removed (5 DPA)1.271621.625331.65431.77115
CAR15Developing grain, bracts removed (15 DPA)4.302277.305436.8579417.3319



CDS Structure of MLOC_40224






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK251038.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251038.1NoneNoneNoneNone
MLOC_15658.2NoneAvailableNonecontig_1571238 (Mapped)
MLOC_18860.1NoneAvailableNonecontig_1582336 (Mapped)
MLOC_40224.1NoneAvailableAvailablecontig_2557171 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----