MLOC_40166 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains25.229727.44333.89970
LEAShoots from the seedlings (10 cm shoot stage)32.039712.938214.59940
INF1Young developing inflorescences (5mm)73.733590.333888.07540
INF2Developing inflorescences (1-1.5 cm)88.6421101.85997.42680
ROORoots from the seedlings (10 cm shoot stage)28.99134.224134.42720
NODDeveloping tillers at six leaf stage, 3rd internode15.820718.917713.63110
CAR5Developing grain, bracts removed (5 DPA)80.769169.329987.05970
CAR15Developing grain, bracts removed (15 DPA)27.363323.53227.09230



CDS Structure of MLOC_40166






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK362841
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362841CUST_20616_PI427708080NoneNoneNone
MLOC_32754.1NoneAvailableNonecontig_231678 (Mapped)
MLOC_40166.1NoneAvailableNonecontig_2556631 (Mapped)
MLOC_64.1NoneAvailableNonecontig_10040 (Mapped)
MLOC_8295.1NoneAvailableAvailablecontig_141911 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----