MLOC_40090 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains22.222823.261427.84740
LEAShoots from the seedlings (10 cm shoot stage)13.51816.791514.71350
INF1Young developing inflorescences (5mm)1.95273.055723.662250
INF2Developing inflorescences (1-1.5 cm)2.989852.245122.225440
ROORoots from the seedlings (10 cm shoot stage)35.228727.942324.92630
NODDeveloping tillers at six leaf stage, 3rd internode37.857316.927943.90280
CAR5Developing grain, bracts removed (5 DPA)3.558783.355443.336560
CAR15Developing grain, bracts removed (15 DPA)0.8351961.021460.8635120



CDS Structure of MLOC_40090






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK359794
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359794CUST_13674_PI427708083NoneNoneNone
MLOC_40090.1NoneAvailableNonecontig_2556172 (Mapped)
MLOC_64925.1NoneAvailableAvailablecontig_49518 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----