MLOC_40056 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.094813.628512.98412.1269
LEAShoots from the seedlings (10 cm shoot stage)11.071311.160314.116710.1556
INF1Young developing inflorescences (5mm)17.447616.584115.133612.7408
INF2Developing inflorescences (1-1.5 cm)15.882816.379216.674216.4263
ROORoots from the seedlings (10 cm shoot stage)7.4030812.580810.053713.3359
NODDeveloping tillers at six leaf stage, 3rd internode5.866816.7185910.464625.6447
CAR5Developing grain, bracts removed (5 DPA)16.393616.961217.907115.0686
CAR15Developing grain, bracts removed (15 DPA)14.902214.194513.310229.0182



CDS Structure of MLOC_40056






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_40056.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372552NoneNoneNoneNone
MLOC_40056.1CUST_2558_PI427708080AvailableAvailablecontig_2556015 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g55050.2 -2 1e-158 471 259/503 (51%) 13102.m12463 protein OsFBX64 - F-box domain containing protein, expressed
TAIR PP10None-----