MLOC_40054 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.510819.287016.167090
LEAShoots from the seedlings (10 cm shoot stage)5.389845.954775.16120
INF1Young developing inflorescences (5mm)5.200574.729936.308060
INF2Developing inflorescences (1-1.5 cm)3.178692.483612.619190
ROORoots from the seedlings (10 cm shoot stage)4.479493.592775.785920
NODDeveloping tillers at six leaf stage, 3rd internode4.180550.8118680.5961990
CAR5Developing grain, bracts removed (5 DPA)2.257221.863993.142850
CAR15Developing grain, bracts removed (15 DPA)0.4805980.2753390.173330



CDS Structure of MLOC_40054






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK363904
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363904CUST_20803_PI427708080NoneNoneNone
MLOC_19974.1NoneAvailableAvailablecontig_158741 (Mapped)
MLOC_40054.1NoneAvailableNonecontig_2556003 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----