MLOC_40000 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.650933.607624.985721.4114
LEAShoots from the seedlings (10 cm shoot stage)23.607815.265418.201814.6315
INF1Young developing inflorescences (5mm)65.642456.457756.613840.8335
INF2Developing inflorescences (1-1.5 cm)51.884552.159543.37146.7057
ROORoots from the seedlings (10 cm shoot stage)11.018225.440320.171122.4268
NODDeveloping tillers at six leaf stage, 3rd internode2.856734.522686.1642113.8634
CAR5Developing grain, bracts removed (5 DPA)40.613934.48446.249232.3069
CAR15Developing grain, bracts removed (15 DPA)10.952911.17389.2657219.6737



CDS Structure of MLOC_40000






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248191.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248191.1CUST_18517_PI427708080NoneNoneNone
MLOC_11750.1NoneAvailableNonecontig_1561759 (Mapped)
MLOC_23917.1NoneAvailableNonecontig_1632235 (Mapped)
MLOC_39955.2NoneAvailableNonecontig_2555618 (Not mapped)
MLOC_40000.1NoneAvailableAvailablecontig_2555765 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----