MLOC_39997 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.6170260.7873740.5182150.635969
LEAShoots from the seedlings (10 cm shoot stage)0.6257260.7156790.4617370.486641
INF1Young developing inflorescences (5mm)4.536342.856173.512922.79079
INF2Developing inflorescences (1-1.5 cm)5.44385.883235.567095.61139
ROORoots from the seedlings (10 cm shoot stage)0.2216890.6035620.3440460.581129
NODDeveloping tillers at six leaf stage, 3rd internode0.04424960.06910270.05287630.214918
CAR5Developing grain, bracts removed (5 DPA)00.1311740.1366450.116916
CAR15Developing grain, bracts removed (15 DPA)0.2434590.02720620.3169690.377418



CDS Structure of MLOC_39997






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_39997.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_39997.1CUST_11806_PI427708080AvailableAvailablecontig_2555757 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g39640.1 -3 0.0 1010 498/585 (85%) 13106.m04111 protein PINHEAD, putative, expressed
TAIR PP10 AT5G43810.2 -3 0.0 942 459/589 (78%) | Symbols: ZLL | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | chr5:17611939-17616562 FORWARD LENGTH=988