MLOC_39993 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.103546000.0715199
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.0618671000.0556818
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)8.537772.405444.780223.93357
NODDeveloping tillers at six leaf stage, 3rd internode00.017418900.124381
CAR5Developing grain, bracts removed (5 DPA)1.375650.896150.7331561.08122
CAR15Developing grain, bracts removed (15 DPA)4.693822.416572.622918.7946



CDS Structure of MLOC_39993






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK367417
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367417CUST_21464_PI427708080NoneNoneNone
MLOC_1541.1NoneAvailableNonecontig_1136324 (Not mapped)
MLOC_39993.1NoneAvailableAvailablecontig_2555748 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----