- Predicted Gene MLOC_39957
MLOC_39957 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_39957_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_39957_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.367743 | 0.337387 | 0.418079 | 0.284262 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.587644 | 0.785159 | 0.687224 | 0.505572 |
INF1 | Young developing inflorescences (5mm) | 0.396374 | 0.368351 | 1.05871 | 0.394637 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.09677 | 0.9512 | 0.650846 | 0.854306 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.475969 | 0.960845 | 0.661872 | 0.841978 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.274619 | 0.62339 | 0.670215 | 1.98243 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.484845 | 0.521024 | 1.18757 | 0.555897 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.348631 | 0.266782 | 0.28188 | 0.572575 |
CDS Structure of MLOC_39957
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39957.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g20970.1 |
+3 |
2e-61 |
209 |
112/188 (60%) |
13101.m02229 protein invertase/pectin methylesterase inhibitor family protein, putative, expressed |
TAIR PP10 | None | - | - | - | - | - |