MLOC_39955 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains20.400610.698312.34950
LEAShoots from the seedlings (10 cm shoot stage)7.618615.6178711.87250
INF1Young developing inflorescences (5mm)21.788321.921324.70080
INF2Developing inflorescences (1-1.5 cm)16.380917.272718.28240
ROORoots from the seedlings (10 cm shoot stage)8.6054111.29477.478080
NODDeveloping tillers at six leaf stage, 3rd internode3.003984.324637.061240
CAR5Developing grain, bracts removed (5 DPA)15.616615.193914.40550
CAR15Developing grain, bracts removed (15 DPA)3.552594.061253.201070



CDS Structure of MLOC_39955






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248191.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248191.1CUST_18517_PI427708080NoneNoneNone
MLOC_11750.1NoneAvailableNonecontig_1561759 (Mapped)
MLOC_23917.1NoneAvailableNonecontig_1632235 (Mapped)
MLOC_39955.2NoneAvailableNonecontig_2555618 (Not mapped)
MLOC_40000.1NoneAvailableAvailablecontig_2555765 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----