MLOC_39937 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.9902146.992440.56490
LEAShoots from the seedlings (10 cm shoot stage)54.956449.110226.10350
INF1Young developing inflorescences (5mm)68.402949.943946.57180
INF2Developing inflorescences (1-1.5 cm)75.4856.689462.09440
ROORoots from the seedlings (10 cm shoot stage)8.7952927.70232.160
NODDeveloping tillers at six leaf stage, 3rd internode23.738511.656911.71270
CAR5Developing grain, bracts removed (5 DPA)53.21943.431546.46970
CAR15Developing grain, bracts removed (15 DPA)23.038817.469422.59340



CDS Structure of MLOC_39937






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK364088
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364088CUST_20829_PI427708080NoneNoneNone
MLOC_16534.3NoneAvailableAvailablecontig_1573630 (Mapped)
MLOC_37909.3NoneAvailableNonecontig_2549334 (Mapped)
MLOC_38238.3NoneAvailableNonecontig_2550009 (Mapped)
MLOC_39937.1NoneAvailableNonecontig_2555544 (Not mapped)
MLOC_6573.1NoneAvailableNonecontig_137745 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----