- Predicted Gene MLOC_39912
MLOC_39912 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_39912_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_39912_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 3.34586 | 4.87108 | 1.92866 | 2.6707 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.37773 | 1.8693 | 2.43527 | 2.30175 |
INF1 | Young developing inflorescences (5mm) | 12.3073 | 11.5109 | 14.4994 | 7.44876 |
INF2 | Developing inflorescences (1-1.5 cm) | 13.1003 | 15.8996 | 11.3157 | 11.9095 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.80349 | 2.01925 | 1.36043 | 1.89725 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.02788 | 3.21197 | 3.44021 | 7.72715 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.406 | 5.58916 | 6.43413 | 3.83694 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.602407 | 0.824679 | 1.50301 | 1.44037 |
CDS Structure of MLOC_39912
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39912.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g10190.1 |
+3 |
1e-29 |
115 |
56/69 (81%) |
13110.m00915 protein ATP-binding region, ATPase-like domain containing protein, expressed |
TAIR PP10 |
AT4G36290.1 |
+3 |
5e-22 |
93 |
41/61 (67%) |
| Symbols: CRT1 | compromised recognition of TCV 1 | chr4:17169669-17173187 REVERSE LENGTH=635 |