MLOC_39882 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.794678.3853310.3190
LEAShoots from the seedlings (10 cm shoot stage)8.492899.48710.26690
INF1Young developing inflorescences (5mm)14.788211.827215.86910
INF2Developing inflorescences (1-1.5 cm)21.922916.131420.27390
ROORoots from the seedlings (10 cm shoot stage)6.7249710.236611.19420
NODDeveloping tillers at six leaf stage, 3rd internode8.135993.798135.900820
CAR5Developing grain, bracts removed (5 DPA)12.688313.944815.72010
CAR15Developing grain, bracts removed (15 DPA)9.688648.669478.944680



CDS Structure of MLOC_39882






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK376808
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376808CUST_23094_PI427708080NoneNoneNone
MLOC_27833.1NoneAvailableNonecontig_186684 (Mapped)
MLOC_34036.1NoneAvailableAvailablecontig_242109 (Mapped)
MLOC_39882.1NoneAvailableNonecontig_2555268 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----