- Predicted Gene MLOC_39877
MLOC_39877 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.49525 | 5.0584 | 6.09855 | 4.98192 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.93607 | 3.92349 | 2.83235 | 2.68885 |
| INF1 | Young developing inflorescences (5mm) | 3.70701 | 4.09505 | 3.82726 | 3.39379 |
| INF2 | Developing inflorescences (1-1.5 cm) | 6.89772 | 3.88417 | 2.97297 | 5.31576 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.85158 | 5.11347 | 4.5571 | 6.22812 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.05933 | 6.61248 | 17.5218 | 26.3753 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.3015 | 2.37684 | 2.36449 | 2.40884 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.15375 | 1.73583 | 1.95692 | 4.76422 |
CDS Structure of MLOC_39877
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39877.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g36670.1 |
+2 |
2e-46 |
171 |
103/114 (90%) |
13112.m03756 protein F-box/LRR-repeat protein 3, putative, expressed |
| TAIR PP10 |
AT5G27920.1 |
+2 |
2e-24 |
105 |
64/114 (56%) |
F-box family protein | chr5:9942063-9944507 REVERSE LENGTH=642 |