MLOC_39867 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.372650.4571470
LEAShoots from the seedlings (10 cm shoot stage)0.5334860.6902990.4765930
INF1Young developing inflorescences (5mm)0.9615580.3041771.124780
INF2Developing inflorescences (1-1.5 cm)0.8195930.9412021.348450
ROORoots from the seedlings (10 cm shoot stage)0.2945710.2409950.5056290
NODDeveloping tillers at six leaf stage, 3rd internode0.2737560.3508380.2663490
CAR5Developing grain, bracts removed (5 DPA)1.387730.8646851.135570
CAR15Developing grain, bracts removed (15 DPA)0.3195670.08410020.5982590



CDS Structure of MLOC_39867






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK372571
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372571CUST_22333_PI427708080NoneNoneNone
MLOC_39867.2NoneAvailableNonecontig_255515 (Mapped)
MLOC_46719.1NoneAvailableNonecontig_294742 (Mapped)
MLOC_69504.1NoneAvailableAvailablecontig_56525 (Mapped)
MLOC_8861.1NoneAvailableNonecontig_146933 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----