- Predicted Gene MLOC_39847
MLOC_39847 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.264766 | 0.177439 | 0.439929 | 0.240548 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0478623 | 0 | 0 | 0.0579693 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.102818 | 0.0865616 | 0 | 0.356956 |
CAR5 | Developing grain, bracts removed (5 DPA) | 59.8236 | 61.7735 | 62.2516 | 55.1193 |
CAR15 | Developing grain, bracts removed (15 DPA) | 25.9475 | 19.6097 | 25.9796 | 49.0983 |
CDS Structure of MLOC_39847
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39847.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g54160.2 |
+2 |
5e-61 |
203 |
146/238 (61%) |
13102.m12340 protein AP2 domain containing protein, expressed |
TAIR PP10 | None | - | - | - | - | - |