- Predicted Gene MLOC_39822
MLOC_39822 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 47.0651 | 37.668 | 47.7623 | 37.551 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 37.7386 | 46.1619 | 44.0875 | 31.1583 |
| INF1 | Young developing inflorescences (5mm) | 25.9572 | 34.2358 | 33.2187 | 20.8438 |
| INF2 | Developing inflorescences (1-1.5 cm) | 28.8539 | 34.1584 | 24.2112 | 28.5581 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 51.5997 | 32.7662 | 32.1785 | 38.8724 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 26.8026 | 30.1419 | 18.8515 | 82.4426 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 38.0993 | 37.4015 | 38.151 | 30.3276 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.01759 | 6.92167 | 7.61331 | 15.0332 |
CDS Structure of MLOC_39822
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39822.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g29620.1 |
+1 |
7e-80 |
249 |
116/141 (82%) |
13107.m02977 protein OsSCP39 - Putative Serine Carboxypeptidase homologue, expressed |
| TAIR PP10 |
AT3G10410.1 |
+1 |
3e-69 |
220 |
101/141 (72%) |
| Symbols: SCPL49, CPY | SERINE CARBOXYPEPTIDASE-LIKE 49 | chr3:3235518-3238063 REVERSE LENGTH=516 |