MLOC_3981 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.61939 | 4.03112 | 3.69226 | 4.39162 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.88766 | 2.90936 | 4.56182 | 3.15287 |
| INF1 | Young developing inflorescences (5mm) | 7.37035 | 6.90938 | 7.95786 | 6.42698 |
| INF2 | Developing inflorescences (1-1.5 cm) | 5.76821 | 6.31437 | 5.83271 | 6.93738 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.02565 | 4.24494 | 3.22528 | 4.78908 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.442897 | 0.749328 | 2.3699 | 3.36599 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.44311 | 6.08902 | 5.09773 | 5.75832 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.1668 | 1.40221 | 1.48316 | 4.18488 |
CDS Structure of MLOC_3981
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3981.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g26850.1 |
+2 |
8e-104 |
314 |
181/274 (66%) |
13102.m02919 protein rRNA-processing protein FCF, putative, expressed |
| TAIR PP10 |
AT2G34570.1 |
+2 |
2e-52 |
180 |
103/271 (38%) |
| Symbols: MEE21 | PIN domain-like family protein | chr2:14563048-14564681 REVERSE LENGTH=281 |
