- Predicted Gene MLOC_39807
MLOC_39807 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_39807_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_39807_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 13.3131 | 14.5355 | 14.6581 | 13.4003 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 13.5905 | 8.28936 | 9.75866 | 9.05423 |
INF1 | Young developing inflorescences (5mm) | 33.6173 | 33.1914 | 31.4172 | 25.1549 |
INF2 | Developing inflorescences (1-1.5 cm) | 28.6582 | 29.6014 | 31.8482 | 30.3728 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.08598 | 12.9627 | 15.6629 | 14.0109 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.17238 | 4.70347 | 9.59305 | 19.2663 |
CAR5 | Developing grain, bracts removed (5 DPA) | 17.7912 | 18.4235 | 16.5992 | 15.9852 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.33149 | 5.87192 | 6.01597 | 12.263 |
CDS Structure of MLOC_39807
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39807.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g27870.1 |
+1 |
0.0 |
785 |
407/519 (78%) |
13105.m02862 protein expressed protein |
TAIR PP10 |
AT5G58450.1 |
+1 |
2e-121 |
388 |
240/529 (45%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:23626826-23632071 FORWARD LENGTH=1065 |