- Predicted Gene MLOC_39800
MLOC_39800 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.66206 | 3.78422 | 3.04022 | 2.62508 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.38883 | 6.11881 | 4.1042 | 3.57715 |
| INF1 | Young developing inflorescences (5mm) | 2.60415 | 2.62031 | 3.92056 | 2.29068 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.63595 | 5.40535 | 5.76535 | 6.71176 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.31001 | 3.5981 | 4.46993 | 3.52557 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.46747 | 2.8924 | 3.7549 | 7.41879 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.42847 | 3.22006 | 3.9867 | 3.41322 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.94167 | 3.56797 | 3.14166 | 7.74104 |
CDS Structure of MLOC_39800
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39800.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g70380.1 |
+3 |
3e-27 |
114 |
56/64 (88%) |
13101.m07647 protein serine palmitoyltransferase 2, putative, expressed |
| TAIR PP10 |
AT5G23670.2 |
+3 |
1e-20 |
94 |
45/64 (70%) |
| Symbols: LCB2 | long chain base2 | chr5:7981889-7985037 FORWARD LENGTH=489 |