- Predicted Gene MLOC_39797
MLOC_39797 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_39797_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_39797_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 3.56868 | 19.2998 | 20.7664 | 21.9843 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 13.2195 | 42.2114 | 16.5061 | 24.8639 |
INF1 | Young developing inflorescences (5mm) | 22.9834 | 20.5665 | 32.3346 | 33.7632 |
INF2 | Developing inflorescences (1-1.5 cm) | 50.2032 | 39.1551 | 32.2004 | 72.8289 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 17.2338 | 9.95097 | 23.8487 |
NOD | Developing tillers at six leaf stage, 3rd internode | 11.7249 | 16.5959 | 22.8557 | 72.0892 |
CAR5 | Developing grain, bracts removed (5 DPA) | 23.6143 | 26.298 | 39.7861 | 39.1777 |
CAR15 | Developing grain, bracts removed (15 DPA) | 27.4169 | 21.1004 | 12.7035 | 68.1382 |
CDS Structure of MLOC_39797
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39797.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g09120.1 |
+1 |
4e-25 |
98 |
44/46 (96%) |
13112.m00966 protein mRNA-capping enzyme, putative, expressed |
TAIR PP10 |
AT3G09100.1 |
+1 |
2e-16 |
72 |
31/43 (72%) |
mRNA capping enzyme family protein | chr3:2790038-2792913 REVERSE LENGTH=471 |