MLOC_3979 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.62954 | 3.42628 | 2.87025 | 2.01946 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.11463 | 3.203 | 1.68489 | 1.80118 |
| INF1 | Young developing inflorescences (5mm) | 7.22549 | 6.74034 | 6.76527 | 4.21251 |
| INF2 | Developing inflorescences (1-1.5 cm) | 13.2557 | 9.69577 | 10.4812 | 9.28889 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.50813 | 2.84619 | 3.81826 | 2.3603 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.81873 | 1.38871 | 2.89029 | 4.30265 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.01149 | 5.77608 | 5.39195 | 3.97398 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.75269 | 3.66682 | 3.46665 | 5.87493 |
CDS Structure of MLOC_3979
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3979.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g23160.1 |
+2 |
5e-53 |
191 |
116/123 (94%) |
13106.m02488 protein bacterial transferase hexapeptide domain containing protein, expressed |
| TAIR PP10 |
AT5G19485.1 |
+2 |
6e-30 |
123 |
70/120 (58%) |
transferases;nucleotidyltransferases | chr5:6573907-6576352 REVERSE LENGTH=456 |
