MLOC_3977 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains17.063146.701539.16734.6683
LEAShoots from the seedlings (10 cm shoot stage)33.698149.728433.931332.2826
INF1Young developing inflorescences (5mm)45.760240.421740.773833.0214
INF2Developing inflorescences (1-1.5 cm)47.280735.536834.492840.4669
ROORoots from the seedlings (10 cm shoot stage)8.0694119.716314.370720.4329
NODDeveloping tillers at six leaf stage, 3rd internode5.042985.788466.9016820.7232
CAR5Developing grain, bracts removed (5 DPA)19.466216.957720.042216.7442
CAR15Developing grain, bracts removed (15 DPA)22.577818.064419.207741.5764



CDS Structure of MLOC_3977






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_3977.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_3977.2CUST_11791_PI427708080AvailableAvailablecontig_134519 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g66500.1 +2 0.0 2330 1198/1421 (84%) 13101.m07198 protein phosphoribosylformylglycinamidine synthase, putative, expressed
TAIR PP10 AT1G74260.1 +2 0.0 1934 982/1326 (74%) | Symbols: PUR4 | purine biosynthesis 4 | chr1:27923005-27927764 REVERSE LENGTH=1407