MLOC_3976 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains31.21325.398921.495430.5517
LEAShoots from the seedlings (10 cm shoot stage)11.53115.030186.144196.58334
INF1Young developing inflorescences (5mm)76.198974.41988.764482.198
INF2Developing inflorescences (1-1.5 cm)84.738582.196101.43121.155
ROORoots from the seedlings (10 cm shoot stage)36.379831.611344.442548.6143
NODDeveloping tillers at six leaf stage, 3rd internode1.448681.166273.74825.42856
CAR5Developing grain, bracts removed (5 DPA)26.821828.132825.902434.7179
CAR15Developing grain, bracts removed (15 DPA)9.135077.714375.4574621.6703



CDS Structure of MLOC_3976






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_3976.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252429.1NoneNoneNoneNone
MLOC_3976.1CUST_185_PI427708080AvailableAvailablecontig_134519 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g32470.1 +1 6e-20 87 84/158 (53%) 13104.m03109 protein expressed protein
TAIR PP10None-----