- Predicted Gene MLOC_39738
MLOC_39738 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_39738_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.614382 | 1.47105 | 1.17159 | 1.12194 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.67048 | 1.0159 | 0.900022 | 1.00443 |
INF1 | Young developing inflorescences (5mm) | 4.78667 | 4.46363 | 4.52339 | 3.69356 |
INF2 | Developing inflorescences (1-1.5 cm) | 7.48217 | 6.45954 | 5.75197 | 6.93472 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.259039 | 0.689031 | 1.07579 | 0.75386 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.117504 | 0.176272 | 0.251985 | 0.604582 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.86618 | 2.01398 | 2.32978 | 1.88888 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.71 | 1.08175 | 1.07501 | 3.01084 |
CDS Structure of MLOC_39738
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39738.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g47570.1 |
+3 |
0.0 |
1524 |
756/966 (78%) |
13106.m05051 protein PPR repeat containing protein, expressed |
TAIR PP10 |
AT5G65560.1 |
+3 |
5e-162 |
509 |
281/757 (37%) |
Pentatricopeptide repeat (PPR) superfamily protein | chr5:26201012-26203759 REVERSE LENGTH=915 |