- Predicted Gene MLOC_39708
MLOC_39708 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_39708_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_39708_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0.067624 | 0.0381404 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 19.7385 | 53.8168 | 45.6489 | 30.6048 |
INF1 | Young developing inflorescences (5mm) | 0 | 0.0451322 | 0.110441 | 0.0721517 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0.0323269 | 0.0473226 | 0.0721389 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.0478369 | 0 | 0.199108 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.45567 | 2.65407 | 21.0135 | 18.3022 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0.0477695 | 0.0356822 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.139196 | 0.0951027 | 0 | 0.361267 |
CDS Structure of MLOC_39708
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39708.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g30230.1 |
+1 |
8e-117 |
351 |
189/340 (56%) |
13109.m03018 protein disease resistance protein RPM1, putative, expressed |
TAIR PP10 |
AT3G07040.1 |
+1 |
6e-41 |
157 |
105/369 (28%) |
| Symbols: RPM1, RPS3 | NB-ARC domain-containing disease resistance protein | chr3:2226244-2229024 REVERSE LENGTH=926 |