- Predicted Gene MLOC_39693
MLOC_39693 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.23541 | 6.00735 | 5.75117 | 6.89768 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 9.0553 | 8.1817 | 7.58557 | 7.66438 |
| INF1 | Young developing inflorescences (5mm) | 6.91367 | 6.21292 | 7.52418 | 6.57478 |
| INF2 | Developing inflorescences (1-1.5 cm) | 12.1707 | 10.6281 | 11.2268 | 13.8199 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.82056 | 1.48498 | 1.11411 | 1.9588 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.10382 | 13.5396 | 18.9633 | 51.3828 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.72456 | 2.76168 | 1.58311 | 2.64364 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.156929 | 0.0862801 | 0.230103 | 0.383719 |
CDS Structure of MLOC_39693
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39693.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g35644.1 |
+1 |
1e-50 |
168 |
85/119 (71%) |
13110.m03205 protein expressed protein |
| TAIR PP10 |
AT1G28100.2 |
+1 |
9e-20 |
85 |
51/107 (48%) |
unknown protein; Has 64 Blast hits to 64 proteins in 27 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:9802120-9803981 FORWARD LENGTH=282 |