MLOC_39691 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.327781.934621.075471.49165
LEAShoots from the seedlings (10 cm shoot stage)0.933084000.901818
INF1Young developing inflorescences (5mm)00.1758950.2067380.292905
INF2Developing inflorescences (1-1.5 cm)00.4087780.5375260.572963
ROORoots from the seedlings (10 cm shoot stage)0.7886840.8802951.12741.02249
NODDeveloping tillers at six leaf stage, 3rd internode1.192030.3917701.29402
CAR5Developing grain, bracts removed (5 DPA)0.1739290.16145300.177071
CAR15Developing grain, bracts removed (15 DPA)00.18492300.473139



CDS Structure of MLOC_39691






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_39691.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_39691.1CUST_5555_PI427708083AvailableAvailablecontig_2554328 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g32280.1 +3 3e-17 77 34/42 (81%) 13109.m03212 protein thaumatin, putative
TAIR PP10 AT5G24620.1 +3 9e-12 62 28/46 (61%) Pathogenesis-related thaumatin superfamily protein | chr5:8430918-8432289 FORWARD LENGTH=420