- Predicted Gene MLOC_39691
MLOC_39691 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.32778 | 1.93462 | 1.07547 | 1.49165 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.933084 | 0 | 0 | 0.901818 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0.175895 | 0.206738 | 0.292905 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0.408778 | 0.537526 | 0.572963 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.788684 | 0.880295 | 1.1274 | 1.02249 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.19203 | 0.39177 | 0 | 1.29402 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.173929 | 0.161453 | 0 | 0.177071 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.184923 | 0 | 0.473139 |
CDS Structure of MLOC_39691
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39691.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g32280.1 |
+3 |
3e-17 |
77 |
34/42 (81%) |
13109.m03212 protein thaumatin, putative |
| TAIR PP10 |
AT5G24620.1 |
+3 |
9e-12 |
62 |
28/46 (61%) |
Pathogenesis-related thaumatin superfamily protein | chr5:8430918-8432289 FORWARD LENGTH=420 |