- Predicted Gene MLOC_39690
MLOC_39690 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 107.824 | 77.368 | 81.6218 | 82.2316 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 37.3821 | 24.9766 | 34.8648 | 25.5323 |
| INF1 | Young developing inflorescences (5mm) | 101.503 | 103.754 | 114.009 | 86.8623 |
| INF2 | Developing inflorescences (1-1.5 cm) | 83.723 | 95.5806 | 111.977 | 97.4981 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 118.448 | 80.0225 | 118.163 | 95.9486 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 15.9504 | 15.9606 | 26.2517 | 50.5347 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 55.8575 | 66.5726 | 57.1856 | 54.7344 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 12.9708 | 13.9846 | 14.264 | 31.295 |
CDS Structure of MLOC_39690
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39690.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g32274.1 |
+2 |
3e-83 |
251 |
119/130 (92%) |
13109.m03211 protein 30S ribosomal protein S16, putative, expressed |
| TAIR PP10 |
AT5G56940.1 |
+2 |
4e-69 |
214 |
100/134 (75%) |
Ribosomal protein S16 family protein | chr5:23030879-23032200 FORWARD LENGTH=135 |