- Predicted Gene MLOC_39670
MLOC_39670 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.18809 | 0.677015 | 1.10077 | 1.05912 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 8.77653 | 18.9817 | 31.4714 | 13.7555 |
| INF1 | Young developing inflorescences (5mm) | 0.236967 | 0.674353 | 0.288438 | 0.301426 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0744427 | 0.421269 | 0.678811 | 0.32386 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.07881 | 2.56693 | 2.14697 | 2.68003 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 12.3214 | 18.397 | 17.8692 | 43.0896 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.28465 | 2.16909 | 3.65309 | 2.06909 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.04833 | 3.36393 | 2.61175 | 7.53141 |
CDS Structure of MLOC_39670
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39670.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g40670.1 |
+1 |
2e-32 |
119 |
57/59 (97%) |
13104.m03968 protein expressed protein |
| TAIR PP10 |
AT5G40500.2 |
+1 |
4e-25 |
98 |
44/59 (75%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 22 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:16227984-16228518 FORWARD LENGTH=114 |