MLOC_3967 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.668610.53848.163210
LEAShoots from the seedlings (10 cm shoot stage)13.17316.305513.92990
INF1Young developing inflorescences (5mm)29.437327.986625.97830
INF2Developing inflorescences (1-1.5 cm)28.093534.4926.03730
ROORoots from the seedlings (10 cm shoot stage)2.002399.083024.640810
NODDeveloping tillers at six leaf stage, 3rd internode2.412314.668355.190770
CAR5Developing grain, bracts removed (5 DPA)11.757910.480612.58140
CAR15Developing grain, bracts removed (15 DPA)16.313814.259115.34390



CDS Structure of MLOC_3967






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK363069
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363069CUST_20658_PI427708080NoneNoneNone
MLOC_23113.1NoneAvailableNonecontig_161734 (Mapped)
MLOC_3967.1NoneAvailableNonecontig_134498 (Mapped)
MLOC_40441.2NoneAvailableAvailablecontig_2559681 (Mapped)
MLOC_46284.1NoneAvailableNonecontig_28806 (Not mapped)
MLOC_48660.1NoneAvailableNonecontig_327508 (Not mapped)
MLOC_70616.1NoneAvailableNonecontig_58245 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----