- Predicted Gene MLOC_39661
MLOC_39661 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_39661_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_39661_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 21.0368 | 16.1525 | 15.5323 | 18.1651 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 17.3382 | 18.5151 | 26.7491 | 17.0366 |
INF1 | Young developing inflorescences (5mm) | 15.0932 | 21.1911 | 19.3523 | 17.1048 |
INF2 | Developing inflorescences (1-1.5 cm) | 17.0727 | 23.7085 | 15.7228 | 23.5291 |
ROO | Roots from the seedlings (10 cm shoot stage) | 24.971 | 17.2832 | 11.6641 | 21.4474 |
NOD | Developing tillers at six leaf stage, 3rd internode | 16.159 | 20.7871 | 26.3372 | 63.1469 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.47145 | 8.58979 | 6.45333 | 8.68128 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.27742 | 2.16035 | 1.96893 | 4.73447 |
CDS Structure of MLOC_39661
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39661.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g48444.1 |
-2 |
6e-77 |
239 |
137/200 (69%) |
13101.m05028 protein OsIAA5 - Auxin-responsive Aux/IAA gene family member, expressed |
TAIR PP10 |
AT2G22670.2 |
-2 |
2e-43 |
153 |
74/123 (60%) |
| Symbols: IAA8 | indoleacetic acid-induced protein 8 | chr2:9637136-9638459 FORWARD LENGTH=319 |