- Predicted Gene MLOC_39647
MLOC_39647 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.9129 | 3.23958 | 4.19224 | 3.51177 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.29723 | 2.54559 | 3.28749 | 2.25092 |
| INF1 | Young developing inflorescences (5mm) | 3.17084 | 2.83845 | 3.95077 | 2.11471 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.78694 | 2.28985 | 1.87714 | 1.71986 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.15602 | 5.21818 | 4.87366 | 4.66715 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.31846 | 2.94903 | 9.5914 | 9.46363 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.10795 | 4.35581 | 4.82153 | 3.23007 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.28737 | 1.95818 | 1.87616 | 3.92332 |
CDS Structure of MLOC_39647
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39647.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g20860.1 |
+1 |
8e-53 |
181 |
115/126 (91%) |
13109.m01990 protein calmodulin-binding protein, putative, expressed |
| TAIR PP10 |
AT5G40190.1 |
+1 |
3e-24 |
100 |
57/100 (57%) |
RNA ligase/cyclic nucleotide phosphodiesterase family protein | chr5:16069298-16069849 REVERSE LENGTH=183 |